self-organizing map toolbox Search Results


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Evaluation and quantification of plant water status during desiccation and recovery of Haberlea rhodopen sis. (A) Drying and recovery of different plants (upper left, Control plants; upper right 120 h of desiccation; lower left, 192 h of desiccation; lower right 36 h of recovery). (B) Box plots of changes in water content during desiccation (blue) and recovery (green). (C) Self organizing map <t>(SOM)</t> visualization of the classified samples according to the four pre-defined neurons for desiccation and recovery. The positions of the scores (leaf samples) derived after Principal Component <t>Analysis</t> <t>(PCA)</t> transformation are clustered in different colors with the neurons according to their weights defined with the two weight vectors, for desiccation (left) and for recovery (right), respectively.
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Evaluation and quantification of plant water status during desiccation and recovery of Haberlea rhodopen sis. (A) Drying and recovery of different plants (upper left, Control plants; upper right 120 h of desiccation; lower left, 192 h of desiccation; lower right 36 h of recovery). (B) Box plots of changes in water content during desiccation (blue) and recovery (green). (C) Self organizing map <t>(SOM)</t> visualization of the classified samples according to the four pre-defined neurons for desiccation and recovery. The positions of the scores (leaf samples) derived after Principal Component <t>Analysis</t> <t>(PCA)</t> transformation are clustered in different colors with the neurons according to their weights defined with the two weight vectors, for desiccation (left) and for recovery (right), respectively.
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Evaluation and quantification of plant water status during desiccation and recovery of Haberlea rhodopen sis. (A) Drying and recovery of different plants (upper left, Control plants; upper right 120 h of desiccation; lower left, 192 h of desiccation; lower right 36 h of recovery). (B) Box plots of changes in water content during desiccation (blue) and recovery (green). (C) Self organizing map <t>(SOM)</t> visualization of the classified samples according to the four pre-defined neurons for desiccation and recovery. The positions of the scores (leaf samples) derived after Principal Component <t>Analysis</t> <t>(PCA)</t> transformation are clustered in different colors with the neurons according to their weights defined with the two weight vectors, for desiccation (left) and for recovery (right), respectively.
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Evaluation and quantification of plant water status during desiccation and recovery of Haberlea rhodopen sis. (A) Drying and recovery of different plants (upper left, Control plants; upper right 120 h of desiccation; lower left, 192 h of desiccation; lower right 36 h of recovery). (B) Box plots of changes in water content during desiccation (blue) and recovery (green). (C) Self organizing map <t>(SOM)</t> visualization of the classified samples according to the four pre-defined neurons for desiccation and recovery. The positions of the scores (leaf samples) derived after Principal Component <t>Analysis</t> <t>(PCA)</t> transformation are clustered in different colors with the neurons according to their weights defined with the two weight vectors, for desiccation (left) and for recovery (right), respectively.
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Evaluation and quantification of plant water status during desiccation and recovery of Haberlea rhodopen sis. (A) Drying and recovery of different plants (upper left, Control plants; upper right 120 h of desiccation; lower left, 192 h of desiccation; lower right 36 h of recovery). (B) Box plots of changes in water content during desiccation (blue) and recovery (green). (C) Self organizing map <t>(SOM)</t> visualization of the classified samples according to the four pre-defined neurons for desiccation and recovery. The positions of the scores (leaf samples) derived after Principal Component <t>Analysis</t> <t>(PCA)</t> transformation are clustered in different colors with the neurons according to their weights defined with the two weight vectors, for desiccation (left) and for recovery (right), respectively.
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MathWorks Inc self-organizing maps toolbox
Evaluation and quantification of plant water status during desiccation and recovery of Haberlea rhodopen sis. (A) Drying and recovery of different plants (upper left, Control plants; upper right 120 h of desiccation; lower left, 192 h of desiccation; lower right 36 h of recovery). (B) Box plots of changes in water content during desiccation (blue) and recovery (green). (C) Self organizing map <t>(SOM)</t> visualization of the classified samples according to the four pre-defined neurons for desiccation and recovery. The positions of the scores (leaf samples) derived after Principal Component <t>Analysis</t> <t>(PCA)</t> transformation are clustered in different colors with the neurons according to their weights defined with the two weight vectors, for desiccation (left) and for recovery (right), respectively.
Self Organizing Maps Toolbox, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Evaluation and quantification of plant water status during desiccation and recovery of Haberlea rhodopen sis. (A) Drying and recovery of different plants (upper left, Control plants; upper right 120 h of desiccation; lower left, 192 h of desiccation; lower right 36 h of recovery). (B) Box plots of changes in water content during desiccation (blue) and recovery (green). (C) Self organizing map <t>(SOM)</t> visualization of the classified samples according to the four pre-defined neurons for desiccation and recovery. The positions of the scores (leaf samples) derived after Principal Component <t>Analysis</t> <t>(PCA)</t> transformation are clustered in different colors with the neurons according to their weights defined with the two weight vectors, for desiccation (left) and for recovery (right), respectively.
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MathWorks Inc self-organizing map algorithm som toolbox version 2 for
Evaluation and quantification of plant water status during desiccation and recovery of Haberlea rhodopen sis. (A) Drying and recovery of different plants (upper left, Control plants; upper right 120 h of desiccation; lower left, 192 h of desiccation; lower right 36 h of recovery). (B) Box plots of changes in water content during desiccation (blue) and recovery (green). (C) Self organizing map <t>(SOM)</t> visualization of the classified samples according to the four pre-defined neurons for desiccation and recovery. The positions of the scores (leaf samples) derived after Principal Component <t>Analysis</t> <t>(PCA)</t> transformation are clustered in different colors with the neurons according to their weights defined with the two weight vectors, for desiccation (left) and for recovery (right), respectively.
Self Organizing Map Algorithm Som Toolbox Version 2 For, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Evaluation and quantification of plant water status during desiccation and recovery of Haberlea rhodopen sis. (A) Drying and recovery of different plants (upper left, Control plants; upper right 120 h of desiccation; lower left, 192 h of desiccation; lower right 36 h of recovery). (B) Box plots of changes in water content during desiccation (blue) and recovery (green). (C) Self organizing map (SOM) visualization of the classified samples according to the four pre-defined neurons for desiccation and recovery. The positions of the scores (leaf samples) derived after Principal Component Analysis (PCA) transformation are clustered in different colors with the neurons according to their weights defined with the two weight vectors, for desiccation (left) and for recovery (right), respectively.

Journal: Frontiers in Plant Science

Article Title: In vivo spectroscopy and NMR metabolite fingerprinting approaches to connect the dynamics of photosynthetic and metabolic phenotypes in resurrection plant Haberlea rhodopensis during desiccation and recovery

doi: 10.3389/fpls.2015.00564

Figure Lengend Snippet: Evaluation and quantification of plant water status during desiccation and recovery of Haberlea rhodopen sis. (A) Drying and recovery of different plants (upper left, Control plants; upper right 120 h of desiccation; lower left, 192 h of desiccation; lower right 36 h of recovery). (B) Box plots of changes in water content during desiccation (blue) and recovery (green). (C) Self organizing map (SOM) visualization of the classified samples according to the four pre-defined neurons for desiccation and recovery. The positions of the scores (leaf samples) derived after Principal Component Analysis (PCA) transformation are clustered in different colors with the neurons according to their weights defined with the two weight vectors, for desiccation (left) and for recovery (right), respectively.

Article Snippet: To classify the stress states according to the similarity of JIP parameters, we clustered the scores from the first tree components of PCA under a typical self organizing map (SOM) scheme (neural network toolbox MatLab).

Techniques: Control, Derivative Assay, Transformation Assay